Publications

Earlier

2011

2012

2013

2014

2015

2016

2017

2018

2019

2020

2021

Marju Puurand, Rutt Taba, Kersti Tepp, Anton Terasmaa, Tuuli Käämbre Vähkkasvajate paindlikust ainevahetusest võib saada nende Achilleuse kand. ERR Novaator, 26.06.2025

Moreno-Sanchez, Rafael; Vargas-Navarro, Jorge Luis; Padilla-Flores, Joaquín Alberto; Robledo-Cadena, Diana Xochiquetzal; Granados-Rivas, Juan Carlos; Taba, Rutt; Terasmaa, Anton; Auditano, Giuseppe Leonardo; Kaambre, Tuuli; Rodríguez Enríquez, Sara (2025). Energy Metabolism Behavior and Response to Microenvironmental Factors of the Experimental Cancer Cell Models Differ From That of Actual Human Tumors. Mini-Reviews in Medicinal Chemistry, 25 (4), 319−339. DOI: 10.2174/0113895575322436240924101642.

Taba, Rutt; Põlluaed, Marie; Tein, Karin; Puurand, Marju; Käämbre, Tuuli; Terasmaa, Anton (2025). Effect of Media Composition and Oxygen Tension on Cellular Stress Response and Nrf2 Activation in HepG2ARE Cells. Antioxidants, 14 (2), 137. DOI: 10.3390/antiox14020137.

Reinsalu, Leenu; Miller, Sten; Auditano, Giuseppe Leonardo; Puurand, Marju; Moreno-Sanchez, Rafael; Saavedra, Emma; Valvere, Vahur; Käämbre, Tuuli (2025). Energy Metabolism Profiling of Human Colorectal Tumours. Journal of Cellular and Molecular Medicine, 29 (5), e70462. DOI: 10.1111/jcmm.70462.

Puurand, Marju; Llorente, Alicia; Line, Aija; Kaambre, Tuuli (2025). Exercise-induced extracellular vesicles in reprogramming energy metabolism in cancer. Frontiers in Oncology, 14, ARTN 1480074. DOI: 10.3389/fonc.2024.1480074.

Tepp, Kersti; Auditano, Giuseppe Leonardo; Puurand, Marju; Kaambre, Tuuli (2025). Reliability of Pesticide Toxicity Evaluation: Effects of Pesticides on Cellular Respiration under Conventional Versus Physiological Growth Conditions. Environmental Toxicology and Pharmacology,  DOI: 10.1016/j.etap.2025.104675. 104675.

2024

Sarsenova, Meruert; Lawarde, Ankita; Pathare, Amruta D. S.; Saare, Merli; Modhukur, Vijayachitra; Soplepmann, Pille; Terasmaa, Anton; Käämbre, Tuuli; Gemzell Danielsson, Kristina; Lalitkumar, Parameswaran Grace Luther; Salumets, Andres; Peters, Maire (2024). Endometriotic lesions exhibit distinct metabolic signature compared to paired eutopic endometrium at the single-cell level. In: Endometriotic lesions exhibit distinct metabolic signature compared to paired eutopic endometrium at the single-cell level
BioRxiv: Cold Spring Harbor Laboratory. DOI: 10.1101/2024.02.27.580606.

Aid, Jekaterina; Tanjeko, Ajime Tom; Serre, Jef; Eggelbusch, Moritz; Noort, Wendy; de Wit, Gerard M. J.; van Weeghel, Michel; Puurand, Marju; Tepp, Kersti; Gayan Ramirez, Ghislaine; Degens, Hans; Kaambre, Tuuli; Wust, Rob C. I. (2024). Smoking cessation only partially reverses cardiac metabolic and structural remodeling in mice. Acta Physiologica. DOI: 10.1111/apha.14145.

Llorente, Alicia; Brokāne, Agnese; Mlynska, Agata; Puurand, Marju; Sagini, Krizia; Folkmane, Signe; Hjorth, Marit; Martin‐Gracia, Beatriz; Romero, Silvana; Skorinkina, Diana; Čampa, Mārtiņš; Cešeiko, Rūdolfs; Romanchikova, Nadezhda; Kļaviņa, Aija; Käämbre, Tuuli; Linē, Aija (2024). From sweat to hope: The role of exercise‐induced extracellular vesicles in cancer prevention and treatment. Journal of Extracellular Vesicles, 13 (8), e12500. DOI: 10.1002/jev2.12500.

Sarsenova, Meruert; Lawarde, Ankita; Pathare, Amruta D S; Saare, Merli; Modhukur, Vijayachitra; Soplepmann, Pille; Terasmaa, Anton; Käämbre, Tuuli; Gemzell Danielsson, Kristina; Lalitkumar, Parameswaran Grace Luther; Salumets, Andres; Peters, Maire (2024). Endometriotic lesions exhibit distinct metabolic signature compared to paired eutopic endometrium at the single-cell level. Communications Biology, 7 (1), 1026. DOI: 10.1038/s42003-024-06713-5.

Rodríguez-Enríquez, S.; Robledo-Cadena, D.X.; Pacheco-Velázquez, S.C.; Vargas Navarro, J.L.; Padilla-Flores, J.A.; Kaambre, T.; Moreno-Sánchez, R. (2024). Repurposing auranofin and meclofenamic acid as energy-metabolism inhibitors and anti-cancer drugs. PLoS ONE, 19 (9), 1−22. DOI: 10.1371/journal.pone.0309331.

Robledo-Cadena, Diana Xochiquetzal; Pacheco-Velázquez, Silvia Cecilia; Vargas Navarro, Jorge Luis; Padilla-Flores, Joaquín Alberto; López-Marure, Rebeca; Pérez Torres, Israel; Kaambre, Tuuli; Moreno-Sánchez, Rafael; Rodríguez-Enríquez, Sara (2024). Synergistic celecoxib and dimethyl-celecoxib combinations block cervix cancer growth through multiple mechanisms. PLoS ONE, 19 (9), e0308233. DOI:10.1371/journal.pone.0308233.

2023

Rebane-Klemm, Egle; Reinsalu, Leenu; Puurand, Marju; Shevchuk, Igor; Bogovskaja, Jelena; Suurmaa, Kulliki; Valvere, Vahur; Moreno-Sanchez, Rafael; Kaambre, Tuuli(2023). Colorectal polyps increase the glycolytic activity. Frontiers in Oncology, 13, 1171887. DOI: 10.3389/fonc.2023.1171887.

Puurand, Marju; Tepp, Kersti; Käämbre, Tuuli (2023). Diving into cancer OXPHOS The application of metabolic control analysis to cell and tissue research. Biosystems, 105032. DOI: 10.1016/j.biosystems.2023.105032.

Auditano, Giuseppe Leonardo; Kullison, Karolin; Kaambre, Tuuli; Tepp, Kersti (2023). The Effects of Pesticides on the Bioenergetics of Intestinal Cells. International Conference EcoBalt 2023 “Chemicals & Environment”, 92. MDPI, 66. (1). DOI: 10.3390/proceedings2023092066.

2022

Tepp, Kersti; Aid-Vanakova, Jekaterina; Puurand, Marju; Timohhina, Natalja; Reinsalu, Leenu; Tein, Karin; Plaas, Mario; Shevchuk, Igor; Terasmaa, Anton; Kaambre, Tuuli; (2022). Wolframin deficiency is accompanied with metabolic inflexibility in rat striated muscles. Biochemistry and Biophysics Reports, 30, 101250. DOI: 10.1016/j.bbrep.2022.101250.

Klepinin, Aleksandr; Miller, Sten; Reile, Indrek; Puurand, Marju; Rebane-Klemm, Egle; Klepinina, Ljudmila; Vija, Heiki; Zhang, Song; Terzic, Andre; Dzeja, Petras; and Käämbre, Tuuli (2022). Stable isotope tracing uncovers reduced γ/β-ATP turnover and metabolic flux through mitochondrial-linked phosphotransfer circuits in aggressive breast cancer cells. Frontiers in Oncology, 12 (Cancer Metabolism), 892195. DOI: 10.3389/fonc.2022.892195.

Kaambre, Tuuli (2022). Editorial: Women in cancer metabolism 2021/2022. Frontiers in Oncology, 12, ARTN 1042349. DOI: 10.3389/fonc.2022.1042349.

2021

Zhang, Song; Yamada, Satsuki; Park, Sungjo; Klepinin, Aleksandr; Kaambre, Tuuli; Terzic, Andre; Dzeja, Petras (2021). Adenylate kinase AK2 isoform integral in embryo and adult heart homeostasis. Biochemical and Biophysical Research Communications, 546, 59−64. DOI:10.1016/j.bbrc.2021.01.097

Kaup, Karl Kristjan; Toom, Lauri; Truu, Laura; Miller,Sten; Puurand, Marju; Tepp, Kersti; Käämbre Tuuli; Reile, Indrek (2021). A line-broadening free real-time 31P Pure Shift NMR method for phosphometabolomic analysis. The Analyst, 146 (18), 5502−5507. DOI: 10.1039/d1an01198g.

Reinsalu, Leenu; Puurand, Marju; Chekulayev, Vladimir; Miller, Sten; Shevchuk, Igor; Tepp, Kersti; Rebane-Klemm, Egle; Timohhina, Natalja; Terasmaa, Anton; Kaambre, Tuuli (2021). Energy Metabolic Plasticity of Colorectal Cancer Cells as a Determinant of Tumor Growth and Metastasis. Frontiers in Oncology, 11, ARTN 698951. DOI: 10.3389/fonc.2021.698951.

Klepinina, Ljudmila; Klepinin, Aleksandr; Truu, Laura; Chekulayev, Vladimir; Vija, Heiki; Kuus, Kaisa; Teino, Indrek; Pook, Martin; Maimets, Toivo; Kaambre, Tuuli (2021). Colon cancer cell differentiation by sodium butyrate modulates metabolic plasticity of Caco-2 cells via alteration of phosphotransfer network. PLoS ONE, 16 (1), ARTN e0245348. DOI:10.1371/journal.pone.0245348.

2020

Tepp, Kersti; Puurand, Marju; Timohhina, Natalja; Aid-Vanakova, Jekaterina; Reile, Indrek; Shevchuk, Igor; Chekulayev, Vladimir; Eimre, Margus; Peet, Nadežda; Kadaja, Lumme; Paju, Kalju; Kaambre, Tuuli (2020). Adaptation of mice striated muscles to wolframin deficiency: alterations in cellular bioenergetics. Biochemica et Biophysica Acta. DOI:10.1016/j.bbagen.2020.129523.

Ruiz‐Meana, Marisol; Boengler, Kerstin; Garcia‐Dorado, David; Hausenloy, Derek J.; Käämbre, Tuuli; Kararigas, Georgios; Perrino, Cinzia; Schulz, Rainer; Ytrehus, Kirsti (2020). Ageing, sex and cardioprotection. British Journal of Pharmacology. DOI: 10.1111/bph.14951

Zuurbier, Coert J; Bertrand, Luc; Beauloye, Christoph R; Andreadou, Ioanna; Ruiz Meana, Marisol; Jespersen, Nichlas R; Kula-Alwar, Duvaraka; Prag, Hiran A; Eric Botker, Hans; Dambrova, Maija; Montessuit, Christophe; Kaambre, Tuuli; Liepinsh, Edgars; Brookes, Paul S; Krieg, Thomas (2020). Cardiac metabolism as a driver and therapeutic target of myocardial infarction. Journal of Cellular and Molecular Medicine. DOI: 10.1111/jcmm.15180

Aleksandr Klepinin, Song Zhang, Ljudmila Klepinina, Egle Rebane-Klemm, Andre Terzic, Tuuli Kaambre, Petras Dzeja (2020). Adenylate kinase and metabolic signaling in cancer cells. Frontiers in Oncology, 10, 660. DOI:10.3389/fonc.2020.00660

Koit, Andre; Timohhina, Natalja; Truu, Laura; Chekulayev, Vladimir; Gudlawar, Shivakumar; Shevchuk, Igor; Lepik, Katrin; Mallo, Lea; Kutner, Riina; Valvere, Vahur; Kaambre, Tuuli (2020). Metabolic and OXPHOS Activities Quantified by Temporalex vivoAnalysis Display Patient-Specific Metabolic Vulnerabilities in Human Breast Cancers. Frontiers in Oncology, DOI:10.3389/fonc.2020.01053.

Timohhina, Natalja; Cerrato, Carmine Pasquale; Kurrikoff, Kaido; Chekulayev, Vladimir; Aid-Vanakova, Jekaterina; Puurand, Marju; Tepp, Kersti; Shevchuk, Igor; Langel, Ulo; Kaambre, Tuuli (2020). Viability and mitochondrial bioenergetic functions in human colon cancer cells are not affected by treatment with peptides mtCPP1, UPF25, mtgCPP, and mtCPP1gHO. bioRxiv, 1−20. DOI:10.1101/2020.07.03.185967
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Rebane-Klemm, Egle; Truu, Laura; Reinsalu, Leenu; Puurand, Marju; Shevchuk, Igor; Chekulayev, Vladimir; Timohhina, Natalja; Tepp, Kersti; Bogovskaja, Jelena; Afanasjev, Vladimir; Suurmaa, Külliki; Valvere, Vahur; Käämbre, Tuuli (2020). Mitochondrial Respiration in KRAS and BRAF Mutated Colorectal Tumors and Polyps. Cancers, 12 (4), ARTN 815. DOI:10.3390/cancers12040815.

2019

Mado, Kati; Chekulayev, Vladimir; Shevchuk, Igor; Puurand, Marju; Tepp, Kersti; Kaambre, Tuuli (2019). On the role of tubulin, plectin, desmin and vimentin in the regulation of mitochondrial energy fluxes in muscle cells. American Journal of Physiology – Cell Physiology, 316 (5), C657−C667. DOI: 10.1152/ajpcell.00303.2018.

Puurand, Marju; Tepp, Kersti; Timohhina, Natalja; Aid, Jekaterina; Shevchuk, Igor; Chekulayev, Vladimir; Kaambre, Tuuli. (2019). Tubulin βII and βIII Isoforms as the Regulators of VDAC Channel Permeability in Health and Disease. Cells. DOI:10.3390/cells8030239.

Makrecka‐Kuka, Marina; Liepinsh, Edgars; Murray, Andrew J.; Lemieux, Hélène;
Dambrova, Maija; Tepp, Kersti; Puurand, Marju; Käämbre, Tuuli; Han, Woo Hyun; de Goede, Paul; O’Brien, Katie A.; Turan, Belma; Tuncay, Erkan; Olgar, Yusuf; Rolo, Anabela P.; Palmeira, Carlos M.; Boardman, Neoma T; Wüst, Rob CI; Larsen, Terje S (2019). Altered mitochondrial metabolism in the insulin resistant heart. Acta Physiologica. DOI: 10.1111/apha.13430.

Gnaiger, E; Aasander, Frostner, E; Abumrad, NA; Acuna-Castroviejo, D; Adams, SH; Ahn, B; Ali, SS; Alves, MG; Amati, F; Amoedo, ND; Andreadou, I; Arago, Belenguer, M; Aral, C; Arandarcikaite, O; Armand, AS; Arnould, T; Avram, VF; Bailey, DM; Bajpeyi, S; Bajzikova, M … Zvejniece, L (2019). Mitochondrial respiratory states and rates: Building blocks of mitochondrial physiology. 1−40. DOI:10.26124/mitofit:190001.v6.

2018

Puurand, Marju; Tepp, Kersti; Klepinin, Aleksandr; Klepinina, Lyudmila; Shevchuk, Igor; Kaambre, Tuuli (2018). Intracellular Energy-Transfer Networks and High Resolution Respirometry: A Convenient Approach for Studying Their Function. International Journal of Molecular Sciences, 19 (10). DOI: 10.3390/ijms19102933
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Ounpuu, Lyudmila; Truu, Laura; Shevchuk, Igor; Chekulayev, Vladimir; Klepinin,
Aleksandr; Koit, Andre; Tepp, Kersti; Puurand, Marju; Rebane-Klemm, Egle;
Käämbre, Tuuli (2018). Comparative analysis of the bioenergetics of human adenocarcinoma Caco-2 cell line and postoperative tissue samples from colorectal cancer patients. Biochemistry and Cell Biology. DOI: 10.1139/bcb-2018-0076.

Klepinin, Aleksandr; Ounpuu, Lyudmila; Mado, Kati; Truu, Laura; Chekulayev,
Vladimir; Puurand, Marju; Shevchuk, Igor; Tepp, Kersti; Planken, Anu; Kaambre,
Tuuli (2018). The complexity of mitochondrial outer membrane permeability and VDAC regulation by associated proteins. Journal of Bioenergetics and Biomembranes. DOI: 10.1007/s10863-018-9765-9.

Ounpuu, Ljudmila; Klepinin, Aleksandr; Niemeister, Elen; Vija, Heiki; Kaambre,
Tuuli; (2018). The phosphotransfer network and metabolic plasticity of colon cancer cells. P7 b/12−P7 b/12.

Tepp, Kersti; Puurand, Marju; Klepinin, Aleksandr; Reile, Indrek; Kaambre, Tuuli;
(2018). Alterations in energy transfer pathways in Wfs1 deficient mice. Biochimica et Biophysica Acta (BBA) – Bioenergetics, Volume 1859, Supplement, September 2018, 1859: 20th European Bioenergetics Conference, August 25-30, 2018. Budapest, Hungary: European Bioenergetics Conference, e92.

Truu, Laura; Rebane-Klemm, E.; Shevchuk, I.; Ounpuu, L.; Koit, A.; Chekulayev, V.; Kaambre, T.; (2018). Different regulation of mitochondrial respiration in human colorectal and breast cancer clinical samples. 20th European Bioenergetics
Conference: European Bioenergetics Conference, August 25-30, 2018. Budapest,
Hungary: European Bioenergetics Conference, P7 b/15−P7 b/15.

2017

Ounpuu, Lyudmila; Klepinin, Aleksandr; Pook, Martin; Teino, Indrek; Peet, Nadezda; Paju, Kalju; Tepp, Kersti; Chekulayev, Vladimir; Shevchuk, Igor; Koks, Sulev; Maimets, Toivo; Kaambre, Tuuli (2017). 2102Ep embryonal carcinoma cells have compromised respiration and shifted bioenergetic profile distinct from H9 human embryonic stem cells. Biochimica et Biophysica Acta (BBA) – General Subjects, 1861, 2146−2154. DOI: 10.1016/j.bbagen.2017.05.020.

Koit, Andre; Timohhina, Natalja; Chekulayev, Vladimir; Valvere, Vahur; Kaambre,
Tuuli (2017). Abstract LB-268: Rate of temporal citrate efflux from malignant mitochondria predicts clinical aggressiveness in breast tumors. Cancer Research, 77: AACR Annual Meeting 2017; April 1-5, 2017; Washington, DC. American Association for Cancer Research, LB-268−LB-268. (13 Supplement). DOI: 10.1158/1538 7445.am2017-lb-268

Truu, L.; Koit, A.; Shevchuk, I.; Ounpuu, L.; Klepinin, A.; Chekulayev, V.;
Timohhina, N.; Tepp, K.; Puurand, M.; Heck, K.; Valvere, V.; Guzun, R.; Kaambre, T. (2017). Bioenergetic comparison of human colorectal and breast cancer clinical
patients. FEBS Journal, 284: 42nd FEBS Congress; Jerusalem, Israel; September 10 14, 2017. Wiley, 282−282. (Suppl. 1).

Ounpuu, L.; Klepinin, A.; Pook, M.; Teino, I.; Peet, N.; Paju, K.; Tepp, K.; Timohhina, N.; Chekulayev, V; Shevchuk, I.; Maimets, T.; Kaambre, T. (2017). Human embryonal carcinoma stem cells display distinct bioenergetic profile compared to normal embryonic stem cells. FEBS Journal, 284: 42nd FEBS Congress; Jerusalem, Israel; September 10–14, 2017. Wiley, 254−255. (Suppl. 1).

Kaambre, T.; Chekulayev, V.; Shevchuk, I.; Heck, K.; Truu, L.; Planken, A. (2017).
Alterations in Regulation of Mitochondrial Respiration and Metabolic Fluxes in
Human Colorectal Cancer and Surrounding Tissues. BIT’s 10th Annual World Cancer Congress -2017 (WCC-2017): Barcelona, Spain; 19-21, May 2017. Barcelona, Spain: 10th Annual World Cancer Congress, 100−100.

Koit, Andre; Shevchuk, Igor; Ounpuu, Lyudmila; Klepinin, Aleksandr; Chekulayev,
Vladimir; Timohhina, Natalja; Tepp, Kersti; Puurand, Marju; Truu, Laura; Heck,
Karoliina; Valvere, Vahur; Guzun, Rita; Kaambre, Tuuli (2017). Mitochondrial
Respiration in Human Colorectal and Breast Cancer Clinical Material Is Regulated Differently. Oxidative Medicine and Cellular Longevity, 2017 (1372640), 1−16. DOI: 10.1155/2017/1372640.

Tepp, K.; Puurand, M.; Timohhina, N.; Adamson, J.; Klepinin, A.; Truu, L.; Shevchuk, I.; Chekulayev, V.; Kaambre, T. (2017). Changes in the mitochondrial function and in the efficiency of energy transfer pathways during cardiomyocyte aging. Molecular and Cellular Biochemistry, 432 (1-2), 141−158. DOI: 10.1007/s11010-017-3005-1.

Bagur, Rafaela; Tanguy, Stéphane; Foriel, Sarah; Grichine, Alexei; Sanchez, Caroline; Pernet-Gallay, Karin; Kaambre, Tuuli; Kuznetsov, Andrey V; Usson, Yves; Boucher, François; Guzun, Rita (2016). The impact of cardiac ischemia /reperfusion on the mitochondria-cytoskeleton interactions. Biochimica et Biophysica Acta, 1862 (6), x1159−1171. DOI: 10.1016/j.bbadis.2016.03.009
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Tepp, K.; Timohhina, N.; Puurand, M.; Klepinin,A.; Chekulayev, V.; Shevchuk,I.;
Kaambre, T. (2016). Bioenergetics of the aging heart and skeletal muscles: Modern concepts and controversies. Ageing Research Reviews, 28, 1−14. DOI: 10.1016/j.arr.2016.04.001

Ounpuu, Lyudmila; Klepinin, Aleksandr; Chekulayev, Vladimir; Shevchuk, Igor;
Timohhina, Natalja; Tepp, Kersti; Kaambre, Tuuli; (2016). On the influence of
microenvironment on bioenergetics of bowel cancer. Biochimica et Biophysica Acta
(BBA) – Bioenergetics, 1857, Supplement: EBEC 2016: 19th European Bioenergetics Conference, 02-07 July 2016 Riva del Garda, Italy. Elsevier, e112−e113. DOI: 10.1016/j.bbabio.2016.04.242
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Klepinin, Aleksandr; Ounpuu, Lyudmila; Guzun, Rita; Chekulayev, Vladimir;
Timohhina, Natalja; Tepp, Kersti; Shevchuk, Igor; Schlattner, Uwe; Kaambre, Tuuli (2016). Simple oxygraphic analysis for the presence of adenylate kinase 1 and 2 in normal and tumor cells. Journal of Bioenergetics and Biomembranes, 48 (5), 531−548.

Kersti Tepp; Marju Puurand; Natalja Timohhina; Jasper Adamson; Aleksandr
Klepinin; Igor Shevchuk; Vladimir Chekulayev; Tuuli Käämbre (2016). New aspects of the bioenergetics of the aging heart — Changes in Intracellular Energetic Unit. In: Paolo Bernardi (Ed.). Biochimica et Biophysica Acta (BBA) – Bioenergetics. (e100). EBEC 2016: 19th European Bioenergetics Conference, 02-07 July 2016 Riva del Garda, Italy. Elsevier. (Supplement). DOI: 10.1016/j.bbabio.2016.04.338.

2015

Chekulayev, Vladimir; Mado, Kati; Shevchuk, Igor; Koit, Andre; Kaldma, Andrus;
Klepinin, Aleksandr; Timohhina, Natalja; Tepp, Kersti; Kandashvili, Manana; Ounpuu, Lyudmila; Heck, Karoliina; Truu, Laura; Planken, Anu; Valvere, Vahur; Kaambre, Tuuli (2015). Metabolic remodeling in human colorectal cancer and surrounding tissues: alterations in regulation of mitochondrial respiration and metabolic fluxes. Biochemistry and Biophysics Reports, 4, 111−125.

Guzun, Rita; Kaambre, Tuuli; Bagur, Rafaela; Grichine, Alexei; Usson, Yves;
Varikmaa, Minna; Anmann, Tiia; Tepp, Kersti; Timohhina, Natalja; Shevchuk, Igor; Chekulayev, Vladimir; Boucher, Francois; Dos Santos, Pierre; Schlattner, Uwe; Wallimann, Theo; Kuznetsov, Andrey; Dzeja, Petras; Aliev, Mayis; Saks, Valdur (2015). Modular organization of cardiac energy metabolism: energy conversion, transfer and feedback regulation. Acta Physiologica, 213 (1), 84−106. DOI: 10.1111/apha.12287

2014

Tepp, K.; Mado, K.; Varikmaa, M.; Klepinin, A.; Timohhina, N.; Shevchuk, I.;
Chekulayev, V.; Kuznetsov, A. V.; Guzun, R.; Kaambre, T. (2014). The role of tubulin in the mitochondrial metabolism and arrangement in muscle cells. Journal of Bioenergetics and Biomembranes, 46, 421−434.

Anmann, Tiia; Varikmaa, Minna; Timohhina, Natalja; Tepp, Kersti; Shevchuk, Igor, Chekulayev, Vladimir’; Saks, Valdur; Kaambre, Tuuli. (2014). Formation of highly organized intracellular structure and energy metabolism in cardiac muscle cells during postnatal development of rat heart. Biochimica et Biophysica Acta (BBA) Bioenergetics, 1837 (8), 1350−1361. DOI: 10.1016/j.bbabio.2014.03.015

Kaldma, Andrus; Klepinin, Aleksandr; Chekulayev, Vladimir; Mado, Kati; Shevchuk, Igor; Timohhina, Natalja; Tepp, Kersti; Kandashvili, Manana; Varikmaa, Minna; Koit, Andre; Planken, Margus; Heck, Karoliina; Truu, Laura; Planken, Anu; Valvere, Vahur; Rebane, Egle; Kaambre, Tuuli. (2014). An in situ study of bioenergetic properties of human colorectal cancer: The regulation of mitochondrial respiration and distribution of flux control among the components of ATP synthasome. The International Journal of Biochemistry & Cell Biology, 55, 171−186. DOI: 10.1016/j.biocel.2014.09.004.

Varikmaa, Minna; Bagur, Rafaela; Käämbre, Tuuli; Grichine, Alexei; Timohhina,
Natalja; Tepp, Kersti; Shevchuk, Igor; Chekulayev, Vladimir; Metsis, Madis; Boucher, Francois; Saks, Valdur; Kuznetsov, Andrey V.; Guzun, Rita (2014). Role of mitochondria-cytoskeleton interactions in respiration regulation and mitochondrial organization in striated muscles. Biochimica et Biophysica Acta (BBA) Bioenergetics, 1837 (2), 232−245. DOI: 10.1016/j.bbabio.2013.10.011

Klepinin, Aleksandr; Chekulayev, Vladimir; Timohhina, Natalja; Shevchuk, Igor;
Tepp, Kersti; Kaldma, Andrus; Koit, Andre; Saks, Valdur; Kaambre, Tuuli (2014).
Comparative analysis of some aspects of mitochondrial metabolism in differentiated and undifferentiated neuroblastoma cells. Journal of Bioenergetics and Biomembranes, 46 (1), 17−31. DOI: 10.1007/s10863-013-9529-5

Saks, V.; Schlattner, U.;Tokarska-Schlattner, M.; Wallimann, T.; Bagur, R.; Zorman, S.; Pelosse, M.; Dos Santos, P.; Boucher, F; Kaambre, T.; Guzun, R. (2014). Systems Level Regulation of Cardiac Energy Fluxes Via Metabolic Cycles: Role of Creatine,Phosphotransfer Pathways, and AMPK Signaling. In: Aon, Miguel A.; Saks, Valdur; Schlattner, Uwe (Ed.). ” SYSTEMS BIOLOGY OF METABOLIC AND SIGNALING NETWORKS: ENERGY, MASS AND INFORMATION TRANSFER.”. (261−320). Heidelberg: Springer-Verlag Berlin. (Springer Series in Biophysics; 16). DOI: 10.1007/978-3-642-38505-6_11

2013

Andre; Kaldma, Andrus; Guzun, Rita; Valvere, Vahur; Saks, Valdur (2013). Metabolic Control Analysis of Respiration in Human Cancer Tissue. Frontiers in Physiology, 4, 1−6. DOI: 10.3389/fphys.2013.00151

Varikmaa, M.; Guzun, R.; Grichine, A.; Gonzalez-Granillo, M;, Usson, Y.: Boucher,
F.; Kaambre, T.; Saks, V. (2013). Matters of the heart in bioenergetics: mitochondrial fusion into continuous reticulum is not needed for maximal respiratory activity. Journal of Bioenergetics and Biomembranes, 45 (4), 319−331. DOI: 10.1007/s10863-012 9494-4

Käämbre, Tuuli; Koit, Andre; Ševtšuk, Igor; Tšekulajev, Vladimir; Tepp, Kersti;
Timohhina, Natalja; Bogovskaja, Jelena; Valvere, Vahur; Saks, Valdur (2013). Uusi
suundi kasvajate energiametabolismi uuringutes. Eesti Arst, 92 (5), 261−267.

Anmann, Tiia; Varikmaa, Minna; Tepp, Kersti; Timohhina, Natalja; Ševtšuk, Igor;
Tšekulajev, Vladimir; Saks, Valdur; Käämbre, Tuuli (2013). Südamerakkude
sünnijärgse arengu bioenergeetilised aspektid: struktuuri ja funktsiooni vaheliste seoste väljakujunemine. Eesti Arst, 92 (7), 372−381

Käämbre, Tuuli; Varikmaa, Minna (2013). Energia, elu ja tervis: süsteemibioloogiast, bioenergeetikast ja biomeditsiinist. Horisont, 1, 16−23.
Kuznetsov, A.V.; Guzun, R.; Boucher, F.; Bagur, R.; Käämbre, T.; Saks, V. (2012).
Mysterious Ca2+-independent muscular contraction: deja vu. Biochemical Journal, 445, 333−336. DOI: 10.1042/BJ20120439.

2012

Käämbre, T.; Chekulayev, V.; Shevchuk, I.; Karu-Varikmaa, M.; Timohhina, N.; Tepp, K.; Bogovskaja, J.; Kütner, R.; Valvere, V.; Saks, V. (2012). Metabolic control analysis of cellular respiration in situ in intraoperational samples of human breast cancer. Journal of Bioenergetics and Biomembranes, 44 (5), 539−558. DOI: 10.1007/s10863-012-9457-9

Guzun, R.; Gonzalez-Granillo, M.; Karu-Varikmaa, M.; Grichine, A.; Usson, Y.;
Käämbre, T.; Guerrero-Roesch, K.; Kuznetsov, A.; Schlattner, U.; Saks, V. (2012).
Regulation of respiration in muscle cells in vivo by VDAC through interaction with the cytoskeleton and MtCK within Mitochondrial Interactosome. Biochimica et Biophysica Acta, 1818, 1545−1554. DOI: 10.1016/j.bbamem.2011.12.034
.
Gonzalez-Granillo, M.; Grichine, A.; Guzun, R.; Ussov, Y.; Tepp, K.; Chekulayev, V.; Shevchuk, I.; Karu-Varikmaa, M.; Kuznetsov, A.V.; Grimm, M.; Saks, V.; Käämbre, T. (2012). Studies of the role of tubulin beta II isotype in regulation of mitochondrial respiration in intracellular energetic units in cardiac cells. Journal of Molecular and Cellular Cardiology, 52, 437−447. DOI: 10.1016/j.yjmcc.2011.07.027

Saks, V.; Kuznetsov, A.V.; Gonzalez-Granillo, M.; Tepp, K.; Timohhina, N.; Karu
Varikmaa, M.; Käämbre, T.; Santos, P.D.; Boucher, F.; Guzun, R. (2012). Intracellular energetic Units regulate metabolism in cardiac cells. Journal of Molecular and Cellular Cardiology, 419−436. DOI: 10.1016/j.yjmcc.2011.07.015

2011

Aliev, M., Guzun, R., Karu-Varikmaa, M., Kaambre, T., Wallimann, T., Saks, V.
(2011). Molecular system bioenergics of the heart: experimental studies of metabolic compartmentation and energy fluxes versus computer modeling. International Journal of Molecular Sciences, 12 (12), 9296−9331. DOI: 10.3390/ijms12129296

Tepp, Kersti; Shevchuk, Igor; Chekulayev, Vladimir; Timohhina, Natalja; Kuznetsov, Andrey V.; Guzun, Rita; Saks, Valdur; Käämbre, Tuuli (2011). High efficiency of energy flux controls within mitochondrial interactosome in cardiac intracellular energetic units. Biochimica et Biophysica Acta (BBA) – Bioenergetics, 1807 (12), 1549−1561. DOI: 10.1016/j.bbabio.2011.08.005.

Guzun, R.; Timohhina, N.; Tepp, K.; Gonzalez-Granillo, M.; Shevchuk, I.;
Chekulayev, V.; Kuznetsov, A.V.; Käämbre, T.; Saks, V.A. (2011). Systems
bioenergetics of creatine kinase networks: physiological roles of creatine and phosphocreatine in regulation of cardiac cell function. Amino Acids, 40, 1333−1348.

Guzun, Rita; Karu-Varikmaa, Minna; Gonzalez-Granillo, Marcela; Kuznetsov, Andrey V.; Michel, Lauriane; Cottet-Rousselle, Cecile; Saaremäe, Merle; Käämbre, Tuuli; Metsis, Madis; Grimm, Michael; Auffray, Charles; Saks, Valdur (2011). Mitochondria cytoskeleton interaction: Distribution of beta-tubulins in cardiomyocytes and HL-1 cells. Biochimica et Biophysica Acta (BBA) – Bioenergetics, 1807 (4), 458−469. DOI: 10.1016/j.bbabio.2011.01.010

Martma, K.; Habicht, K.-L.; Martinez Ramirez, X.; Tepp, K.; Käämbre, T.;
Volobujeva, O.; Shimmo, R. (2011). Polydopamine as an adhesive coating for open tubular capillary electrochromatography. Electrophoresis, 32 (9), 1054−1060. DOI:10.1002/elps.201000569.

Karu-Varikmaa, M.; Metsis, M.; Guzun, R.; Käämbre, T.; Grichine, A.; Saks, V.
(2011). Investigation of interactions between mitochondrial creatine kinase and ATP/ADP channel. FEBS Journal, 278, 374−375.

Tepp, K.; Shevchuk, I.; Chekulayev, V.; Timohhina, N.; Saks, V.; Käämbre, T. (2011). High efficiency of energy flux control with mitochondrial interactosome in cardiac cell. FEBS Journal, 278, 377−377.

Saks, V.; Aliev, M.; Tepp, K.; Karu-Varikmaa, M.; Chekulaev, V.; Shevchuk, I.;
Käämbre, T.; Guzun, R. (2011). Quantitative Analysis of Integrated Energy
Metabolism of Muscle Cells: Experimental and Theoretical Studies. Biophysical Journal, 100, 2a−2a.

Gonzalez-Granillo, M.A.; Karu-Varikmaa, M.; Saaremäe, M.; Michel, L.; Käämbre,
T.; Saks, V.; Guzun, R. (2011). Mitochondrial Interactosome in Energy Metabolism in Healthy and Cancer Cells. Biophysical Journal, 100, 298a−298a.

Karu-Varikmaa, M.; Saaremäe, M.; Sikk, P.; Käämbre, T.; Metsis, M.; Saks, V.
(2011). Regulation of Mitochondrial Respiration by Different Tubulin Isoforms in Vivo. Biophysical Journal, 100, 459a−459a.

Earlier

Tepp, Kersti; Timohhina, Natalya; Chekulayev, Vladimir; Shevchuk, Igor; Kaambre, Tuuli; Saks, Valdur (2010). Metabolic control analysis of integrated energy metabolism in permeabilized cardiomyocytes – experimental study. Acta Biochimica Polonica, 57 (4), 421−430.

Saks, Valdur; Guzun, Rita; Timohhina, Natalja; Tepp, Kersti; Varikmaa, Minna;
Monge, Claire; Beraud, Nathalie; Käämbre, Tuuli; Kuznetsov, Andrey; Kadaja,
Lumme; Eimre, Margus; Seppet, Enn (2010). Structure-function relationships in feedback regulation of energy fluxes in vivo in health and disease: Mitochondrial Interactosome. Biochimica et Biophysica Acta, 1797 (6-7), 678−697. DOI: 10.1016/j.bbabio.2010.01.011.

Guerrero, K.; Monge, C.; Brückner, A.; Puurand, U.; Kadaja, L.; Käämbre, T.; Seppet, E.; Saks, V. (2010). Study of possible interactions of tubulin, microtubular network, and STOP protein with mitochondria in muscle cells. Molecular and Cellular Biochemistry, 337, 239−249. DOI: 10.1007/s11010-009-0304-1
Monge, Claire; Guzun, Rita; Tepp, Kersti; Timohhina, Natalja; Varikmaa, Minna;
Sikk, Peeter; Käämbre, Tuuli; Saks, Valdur (2010). Mitochondrial Interactosome in Health and Disease: Structural and Functional Aspects of Molecular System Bioenergetics of Muscle and Neuronal Cells. In: Oliver L. Svensson (Ed.). Mitochondria: Structure, Functions and Dysfunctions. (441−470). Nova Science Publisher Inc..

Varikmaa, Minna; Metsis, Madis; Guzun, Rita; Käämbre, Tuuli; Grichine, Alexei;
Saks, Valdur (2010). Novel Method for Investigation of Interactions between Mitochondrial Creatine Kinase and Adenine Nucleotide Translocase. Biophysical Journal, 98: Biophysical Society 54th Annual Meeting, February 20-24 , San Fransisco. 2010, 735a. (3).

Timohhina, Natalja; Guzun, Rita; Tepp, Kersti; Monge, Claire; Varikmaa, Minna; Vija, Heiki; Sikk, Peeter; Käämbre, Tuuli; Sackett, Dan; Saks, Valdur (2009). Direct measurement of energy fluxes from mitochondria into cytoplasm in permeabilized cardiac cells in situ: some evidence for mitochondrial interactosome. Journal of Bioenergetics and Biomembranes, 41 (3), 259−275.

Guzun, R.; Timohhina, N.; Tepp, K.; Monge, C.; Käämbre, T.; Sikk, P.; Kuznetsov,
AV.; Pison, C.; Saks, V. (2009). Regulation of respiration controlled by mitochondrial creatine kinase in permeabilized cardiac cells in situ importance of system level properties. Biochimica et Biophysica Acta (BBA) – Bioenergetics, 1787 (9), 1089−1105. DOI: 10.1016/j.bbabio.2009.03.024.

Monge, Claire; Beraud, Nathalie; Tepp, Kersti; Pelloux, Sophie; Chahboun, Siham;
Käämbre, Tuuli; Kadaja, Lumme; Roosimaa, Mart; Piirsoo, Andres; Tourneur, Yves; Kuznetsov, Andrey V; Saks, Valdur; Seppet, Enn (2009). Comparative analysis of the bioenergetics of adult cardiomyocytes and nonbeating HL-1 cells: respiratory chain activities, glycolytic enzyme profiles, and metabolic fluxes. Canadian Journal of Physiology and Pharmacology, 87 (4), 318−326.

Sikk, Peeter; Käämbre, Tuuli; Vija, Heiki; Tepp, Kersti; Tiivel, Toomas; Nutt, Anu;
Saks, Valdur (2009). Ultra performance liquid chromatography analysis of adenine nucleotides and creatine derivatives for kinetic studies. Proceedings of the Estonian Academy of Sciences, 58 (2), 122−131.

Sepp, Mervi; Kaambre, Tuuli; Sikk, Peeter; Vendelin, Marko; Birkedal, Rikke (2009). Kinetic studies of intracellular compartmentalization in permeabilized rat cardiomyocytes. The Journal of Physiological Sciences, 59, 362.

Käämbre, Tuuli; Sikk, Peeter; Anmann, Tiia; Tiivel, Toomas; Timohhina, Natalja;
Nutt, Anu; Tepp, Kersti; Saks, Valdur (2008). Südamelihase rakkude struktuuri olulisusest rakuhingamise regulatsioonis. Eesti Arst, 1, 19−22.

Saks, V.; Kaambre, T.; Guzun, R.; Anmann, T.; Sikk, P.; Schlattner, U.; Wallimann,
T.; Aliev, M.; Vendelin, M. (2007). The creatine kinase phosphotransfer network: thermodynamic and kinetic considerations, the impact of the mitochondrial outer membrane and modelling approaches. In: Salomons, G.S.; Wyss, M. (Ed.). Creatine and Creatine Kinase in Health and Disease. (27−65). Dordrecht: Springer. (Subcellular Biochemistry; 46). DOI: 10.1007/978-1-4020-6486-9_3.

Anmann, T.; Guzun, R.; Beraud, N.; Pelloux, S.; Kuznetsov, A.V.; Kogerman, L.;
Kaambre, T.; Sikk, P.; Paju, K.; Peet, N.; Seppet, E.; Ojeda, C.; Tourneur, Y.; Saks, V. (2006). Different kinetics of the regulation of respiration in permeabilized cardiomyocytes and in HL-1 cardiac cells – Importance of cell structure/organization for respiration regulation. Biochimica et Biophysica Acta (BBA) – Bioenergetics, 1757 (12), 1597−1606 . DOI: 10.1016/j.bbabio.2006.09.008
.
Seppet, E.K.; Eimre, M.; Anmann, T.; Seppet, E.; Piirsoo, A.; Peet, N.; Paju, K.;
Guzun, R.; Beraud, N.; Pelloux, S.; Tourneur, Y.; Kuznetsov, A.V.; Käämbre, T.; Sikk, P.; Saks, V.A. (2006). Structure-function relationships in regulation of the energy transfer between mitochondria and ATPases in cardiac cells. Experimental and Clinical Cardiology, 11 (3), 189−194.

Seppet, E.K.; Eimre, M.; Paju, K.; Orlova, E.; Piirsoo, A.; Sikk, P.; Kaambre, T.; Saks, VA. (2006). Calcium-induced contraction of sarcomeres changes the interaction between mitochondria and ATPases in permeabilized cardiac cells. Journal of Molecular and Cellular Cardiology, 40 (6), 931−931.

Eimre, M.; Seppet, E.; Paju, K.; Orlova, E.; Piirsoo, A.; Sikk, P.; Käämbre, T.; Saks,
V. (2006). Kaltsiumist põhjustatud sarkomeeride kontraktsioon muudab mitokondrite ja ATPaaside vahelist interaktsiooni permeabiliseeritud südamerakkudes. 85. , 645−646.

Anmann, T.; Eimre, M.; Kuznetsov, AV.; Andrienko, T.; Kaambre, T.; Sikk, P.;
Seppet, E.; Tiivel, T.; Vendelin, M.; Seppet, E.; Saks, VA. (2005). Calcium-induced contraction of sarcomeres changes the regulation of mitochondrial respiration in permeabilized cardiac cells. FEBS Journal, 272 (12), 3145−3161. DOI:10.1111/j.1742-4658.2005.04734.x.

Seppet, E. K.; Eimre, M.; Anmann, T.; Seppet, E.; Peet, N.; Käämbre, T.; Paju, K.;
Piirsoo, A.; Kuznetsov, A. V.; Vendelin, M.; Gellerich, F. N.; Zierz, S.; Saks, V. A.
(2005). Intracellular energetic units in healthy and diseased hearts. Experimental and Clinical Cardiology, 10 (3), 173−183.

Seppet, EK.; Eimre, M.; Kaambre, T.; Piirsoo, A. (2005). Compartmentation of energy metabolism in heart cells: Structure-function relationships. JOURNAL OF
MOLECULAR AND CELLULAR CARDIOLOGY, 38. , 1065−1066.

Seppet, EK.; Eimre, M.; Andrienko, T.; Kaambre, T.; Sikk, P.; Kuznetsov, AV.; Saks,V. (2004). Studies of mitochondrial respiration in muscle cells in situ: Use and misuse of experimental evidence in mathematical modelling. Molecular and Cellular Biochemistry, 256, 219−227.

Saks, V.; Andrienko, T.; Kuznetsov, A.; Zorov, D; Käämbre, T.; Sikk, P. (2004). Ca2+ contraction and mitochondria in heart: A mechanochemical link? 86. , 336A−337A.

Andrienko, T.; Kuznetsov, A.V.;Kaambre, T.; Usson, Y.; Orosco, A.; Appaix, F.;
Tiivel, T.; Sikk, P.; Vendelin, M.; Margreiter, R.; Saks, V.A. (2003). Metabolic
consequences of functional complexes of mitochondria, myofibrils and sarcoplasmic reticulum in muscle cells. Journal of Experimental Biology, 206 (12), 2059−2072.

Saks, Valdur; Kuznetsov, Andrey; Andrienko, Tatiana; Usson, Yves; Appaix,
Florence; Guerrero, Karen; Kaambre, Tuuli; Sikk, Peeter; Lemba, Maris; Vendelin,
Marko (2003). Heterogeneity of ADP diffusion and regulation of respiration in cardiac cells. Biophysical Journal, 84 (5), 3436−3456. DOI: 10.1016/S0006-3495(03)70065-4.

Appaix, F.; Kuznetsov, A. V.; Usson, Y.; Kay, L.; Andrienko, T.; Olivares, J.;
Kaambre, T.; Sikk, P.; Margreiter, R.; Saks, V. (2003). Possible role of cytoskeleton in intracellular arrangement and regulation of mitochondria. Experimental Physiology, 88, 175−190. DOI: 10.1113/eph8802511

Appaix, F.; Guerrero, K.; Rampal, D.; Izikki, M.; Kaambre, T.; Sikk, P.; Brdiczka, D.; Riva-Lavieille, C.; Olivares, J.; Longuet, M.; Antonsson, B.; Saks, V. (2002). Bax and heart mitochondria: uncoupling and inhibition of respiration without permeability transition. Biochimica et Biophysica Acta, 1556, 156−167.

Seppet, EK.; Kadaja, L.; Braun, U.; Kisand, K.; Metskula, K.; Uibo, R.; Kaambre, T.; Valdur, A. (2002). Intracellular energetic units in cardiac cells: Targets in primary biliary cirrhosis. Journal of Molecular and Cellular Cardiology, 34 (6), A57−A57.

Saks, VA.; Tiivel, T.; Sikk, P.; Kaambre, T.; Kay, L.; Tonkonogi, M.; Seppet, E.;
Sahlin, K. (2000). Metabolic channelling in cardiac cells: Dependence of kinetics of respiration regulation on source of ADP. Biophysical Journal, 78 (1), 197A−197A.

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